BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023E01LP1|AL428057
(959 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1276 1869 0.0
>3x_Contig1276
Length = 6662
Score = 1869 bits (942), Expect = 0.0
Identities = 957/960 (99%), Gaps = 2/960 (0%)
Strand = Plus / Plus
Query: 1 gatcatatgttatcgttggtcttgttgctgtttactttctcttaatttttatcaatgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 gatcatatgttatcgttggtcttgttgctgtttactttctcttaatttttatcaatgttg 1263
Query: 61 gtggaattggtgagattttatccaactttgttg-attctgtattccaacatactattctt 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1264 gtggaattggtgagattttatccaactttgttggattctgtattccaacatactattctt 1323
Query: 120 tgaaagcattgaagactgccacatcaacggatgacacacaattgttaacttattggattg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 tgaaagcattgaagactgccacatcaacggatgacacacaattgttaacttattggattg 1383
Query: 180 ttttttcgtttttgtctgtgatcgagttctggtccaaggctattttgtactgggttccat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 ttttttcgtttttgtctgtgatcgagttctggtccaaggctattttgtactgggttccat 1443
Query: 240 tctactggttctttaagactgttttcttactgtacattgccattccatcattcggcggtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 tctactggttctttaagactgttttcttactgtacattgccattccatcattcggcggtg 1503
Query: 300 cccaacttgtttacacgaggttgatttcaccattctctgacaaatacctacctatcgtgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 cccaacttgtttacacgaggttgatttcaccattctctgacaaatacctacctatcgtgg 1563
Query: 360 aagggaaatcgggagaactggcccagaaagtcgaagctgctgccaacaacgctaaggctt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 aagggaaatcgggagaactggcccagaaagtcgaagctgctgccaacaacgctaaggctt 1623
Query: 420 ctggatactcccgttaaattcttcttagttgaaaaatcaccctctggtccaattttcttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 ctggatactcccgttaaattcttcttagttgaaaaatcaccctctggtccaattttcttt 1683
Query: 480 tgagttcgcttatttgattgcggaaatgtgaactcgtaccggtgtttatcgacatagatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tgagttcgcttatttgattgcggaaatgtgaactcgtaccggtgtttatcgacatagatc 1743
Query: 540 ccttatctacatgatgtgattgttatatcgttttatagtttacacaatattactttaagg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 ccttatctacatgatgtgattgttatatcgttttatagtttacacaatattactttaagg 1803
Query: 600 catctttaacgctcgttaatgggggatgttttcaaatttataatcgaattgatcctcggt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 catctttaacgctcgttaatgggggatgttttcaaatttataatcgaattgatcctcggt 1863
Query: 660 ggagttgatattcaatttgacccttagcttgattttcccagatcctagaattttaagacc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 ggagttgatattcaatttgacccttagcttgattttcccagatcctagaattttaagacc 1923
Query: 720 ctgcttagctacttcacctgtagctaccttgtggcttgacagagatccgaattctgcctt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 ctgcttagctacttcacctgtagctaccttgtggcttgacagagatccgaattctgcctt 1983
Query: 780 ctgtgatttaggaacagcgattaggatctgtaaggtattaatattcgttttagctttcaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1984 ctgtgatttaggaacagcgattaggatctgtaaggtattaatattcgttttagctttcaa 2043
Query: 840 gaataggtctatttcagtacaaccgggggattgacgattctactttaccataaacttcaa 899
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2044 gaataggtctatttcagtacaacc-ggggattgacgattctactttaccataaacttcaa 2102
Query: 900 caatatcagatgagtggatattgatagagtttggtggtatttctatgcgttgttggragg 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2103 caatatcagatgagtggatattgatagagtttggtggtatttctatgcgttgttggaagg 2162
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7344
Number of Sequences: 1807
Number of extensions: 7344
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)